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Author SHA1 Message Date
Split
96af36972f Fix all citations: add missing bib entries from Zotero, fix typos (lunz->lunze, katis_realizibility->realizability), add citations for hybrid automata (Alur), dL (Platzer), KeYmaera X (Fulton), barrier certificates (Prajna), reachability tools (Frehse SpaceEx, Guernic, Mitchell, Bansal HJ), Lyapunov (Branicky), convert biblatex->bibtex format 2026-03-16 17:37:53 -04:00
Split
115ba4e8bb SOTA temporal logic: replace speculative FRET/Pressburger claims with LTL operators from RA, cite Baier 2008 2026-03-16 17:23:35 -04:00
Split
df129dadd9 Move operator staffing data from Human Factors to Broader Impacts 2026-03-16 17:19:15 -04:00
Split
2bcba39e02 SOTA: add temporal logic + FRET subsection before dL, rename dL subsubsection 2026-03-16 17:19:14 -04:00
Dane Sabo
af2ce44fd6 feedback from earlier now integrated. Clear of almost all notes. 2026-03-16 17:15:35 -04:00
Split
6901dc8276 Edit Impacts: flag economic figures for Dane to verify with updated sources 2026-03-16 14:03:18 -04:00
Split
0783555a03 Edit Risks: generalize tool references, clarify boolean abstraction sentence 2026-03-16 14:02:49 -04:00
Split
ae02973908 Edit Metrics: trim verbose opening, add graded responses scope justification 2026-03-16 14:02:03 -04:00
Split
4b2a733621 Edit Research Approach: trim intro, fix issue-point, add explanatory sentences, tighten Emerson section, address all DAS comments 2026-03-16 14:00:27 -04:00
Split
d46e4776e5 Edit State of Art: address all DAS+Split comments, add dL LIMITATION box, fix typo, trim redundancy 2026-03-16 13:55:04 -04:00
Split
c011631557 Edit Goals: fix topic position, integrate qualifications, trim redundancy 2026-03-16 13:53:52 -04:00
Split
54f0f2f1e5 Edit Research Statement: address DAS+Split comments with oldt/newt markup 2026-03-16 13:53:24 -04:00
Split
ed29f6a09b Apply first round of edits with strikethrough/red markup 2026-03-14 23:15:08 -04:00
Split
c7e7845c8f Add DAS reading comments as inline todonotes (cyan) 2026-03-14 23:13:41 -04:00
Split
b2598d3092 Fix unicode and escaping in review comments 2026-03-14 21:37:42 -04:00
Split
8fa41ae2fc Add paper review annotations and comprehensive report 
- Added todonotes to approach.tex with specific citations:
  * FRET validation (Katis 2022, Pressburger 2023)
  * Reactive synthesis (Maoz & Ringert 2015, Luttenberger 2020)
  * Reachability tools (SpaceEx, Flow*, JuliaReach)
  * Barrier certificates (Borrmann 2015, Papachristodoulou 2021)
  * Decomposition-based verification (Kapuria 2025 - same lab/reactor)
  * Expulsory modes with parametric uncertainty (Kapuria 2025)

- Created needs-review-report.md with:
  * Paper summaries (relevance to HAHACS)
  * Supporting evidence by thesis section
  * Gaps identified (8 critical gaps + missing references)
  * Recommended reading priority for candidacy prep
  * Specific recommendations for strengthening claims
  * Summary matrix of all major claims vs. paper support

Note: Kapuria 2025 is most relevant - validates entire approach on SmAHTR.
Key actions: resolve barrier search claim ambiguity, document FMEA → formal
bounds mapping, plan incremental validation.
 2026-03-10 20:50:19 -04:00
Split
c37720f66b Add literature review annotations from NEEDS_REVIEWED papers 
Papers analyzed:
- Katis 2022, Pressburger 2023 (FRET)
- Maoz 2015, Luttenberger 2020 (reactive synthesis)
- Borrmann 2015, SOSTOOLS 2021 (barrier certificates)
- SpaceEx 2011, Flow* 2013, JuliaReach 2019 (reachability)
- Kapuria 2025 (decomposition-based verification)

Key findings:
- FRET lacks liveness support (important gap)
- GR(1) synthesis is tractable for reactor specs
- Compositional verification needs assume-guarantee citations
- Expulsory mode verification needs additional references

Report: needs-review-report.md
 2026-03-10 20:49:34 -04:00
Split
e36b86e39d Convert dense margin comments to inline to fix line tracing 
Reduced marginpar collisions from 12 to 3 by converting multi-line
suggestions/polish comments to \splitinline{} in research-statement.tex
and goals.tex. Remaining warnings are spread across different pages
(4, 5, 7) and no longer cluster/cross.
 2026-03-09 22:07:31 -04:00
Split
02ecfaad94 Clean up repo: remove tracked build artifacts, old versions, cruft 
Removed from tracking:
- Build artifacts (*.aux, *.bbl, *.blg, *.fls, *.fdb_latexmk, *.log, *.toc, *.pdf)
- Old versioned files (v1.tex, v2.tex) - content now in renamed files
- Empty biblatex.sty placeholder
- Vendored todonotes.sty (still in working tree, now gitignored)
- .DS_Store

Updated .gitignore to prevent re-adding *.sty files
 2026-03-09 22:05:33 -04:00
Split
1963233316 Adjust edit mode margins: wider note column, denser text 
- hoffset: -0.5in (shift left)
- textwidth: 5in (denser text)
- marginparwidth: 5cm (2x original, for wider notes)
- marginparsep: 0.3cm (tighter gap)

Layout now: ~60% text left, ~40% comment margin right
 2026-03-09 21:53:21 -04:00
Split
623f760084 Add Split's editorial comments with color-coded feedback 
Edit mode system:
- \editmode{1} enables comments + wider margins
- \editmode{0} hides all comments for final output

Comment types (color-coded):
- \splitnote{} (green): General observations, good work
- \splitsuggest{} (yellow): Suggestions to consider
- \splitpolish{} (orange): Needs polish, should fix
- \splitfix{} (red): Must fix, not acceptable

Comments added throughout all sections with substantive feedback
on structure, wording, and Gopen-style improvements.

Also fixed typos: 'ivariant' → 'invariant', 'excess' → 'access'
 2026-03-09 21:44:23 -04:00
Split
a01f42d47c Fix \split conflict, add .gitignore for build artifacts 
- Renamed \split → \splitnote (\split already defined by another package)
- Added .gitignore for *.aux, *.log, *.pdf, etc.
- Branch switching now clean — just recompile after switch
 2026-03-09 21:34:40 -04:00
Split
3373af9816 Rename versioned files to descriptive names 
Git handles versioning — no need for v1/v2/v3 suffixes.

Renamed:
- research_statement_v1.tex → research-statement.tex
- v1.tex (goals) → goals.tex
- v2.tex (state of art) → state-of-art.tex
- v3.tex (approach) → approach.tex
- v1.tex (metrics) → metrics.tex
- v1.tex (risks) → risks.tex
- v1.tex (impacts) → impacts.tex
- v1.tex (schedule) → schedule.tex

Old v1/v2 versions in subdirs preserved for reference.
 2026-03-09 21:27:20 -04:00
Split
2886662a66 Demo: todonotes integration for Split's editing comments 
Added:
- todonotes.sty (local copy since tlmgr had version mismatch)
- \split{} and \splitinline{} commands for margin/inline comments
- Example comments in goals section demonstrating the workflow

To remove when done: delete the todonotes block in main.tex preamble
 2026-03-09 21:25:00 -04:00
Dane Sabo
edfbb20cbe Auto sync: 2026-03-07 14:29:31 (1 files changed) 
A  "Lang et al. - 2021 - Formal Verification Applied to Spacecraft Attitude Control.pdf"
 2026-03-07 14:29:31 -05:00
Dane Sabo
b05d807e02 Auto sync: 2026-03-07 14:19:48 (8 files changed) 
M  2-state-of-the-art/v2.tex

M  3-research-approach/v3.tex

M  main.aux

M  main.fdb_latexmk

M  main.log

M  main.pdf

M  main.synctex.gz

M  main.toc
 2026-03-07 14:19:48 -05:00
Dane Sabo
f1b43da96f Auto sync: 2026-03-04 13:00:34 (8 files changed) 
M  3-research-approach/v3.tex

M  main.aux

M  main.blg

M  main.fdb_latexmk

M  main.log

M  main.pdf

M  main.synctex.gz

M  main.toc
 2026-03-04 13:00:34 -05:00
Dane Sabo
c3309cf4a4 Auto sync: 2026-03-03 15:30:14 (10 files changed) 
M  3-research-approach/v3.tex

M  main.aux

M  main.blg

M  main.fdb_latexmk

M  main.fls

M  main.log

M  main.pdf

D  main.synctex(busy)
 2026-03-03 15:30:14 -05:00
Dane Sabo
fe81103fea Auto sync: 2026-02-27 14:24:49 (6 files changed) 
M  3-research-approach/v3.tex

M  main.fdb_latexmk

MM main.fls

M  main.log

M  main.pdf

M  main.synctex.gz
 2026-02-27 14:24:49 -05:00
Dane Sabo
b4a4429a6b Auto sync: 2026-02-27 14:12:02 (10 files changed) 
A  2-state-of-the-art/v2.tex

M  main.aux

A  main.fdb_latexmk

AM main.fls

MM main.log

MM main.pdf

A  main.synctex(busy)

A  main.synctex.gz
 2026-02-27 14:12:02 -05:00
Split
6e10a4db81 Add v3 research approach: clean structure, DICE framing, figures 
- Created v3.tex with structure matching Thesis.RA tasks
- Added pyramid figure (strategic/operational/tactical hierarchy)
- Added hybrid automaton figure with guards and dynamics
- Wove in DICE abstract framing (gap, why now, two-layer approach)
- Split contributions marked in blue for review
- Switched main.tex to use v3
 2026-02-23 16:00:41 -05:00
Dane Sabo
de79c28009 Auto sync: 2026-02-23 15:39:50 (4 files changed) 
M  main.fdb_latexmk

M  main.log

M  main.pdf

D  pdflatex88984.fls
 2026-02-23 15:39:50 -05:00
Dane Sabo
5e60ce4289 Auto sync: 2026-02-23 15:29:00 (10 files changed) 
M  .DS_Store

M  3-research-approach/v2.tex

M  main.aux

M  main.fdb_latexmk

M  main.fls

M  main.log

M  main.pdf

M  main.synctex.gz
 2026-02-23 15:29:00 -05:00
Dane Sabo
28091b89a9 Auto sync: 2026-02-10 21:15:03 (1 files changed) 
M  3-research-approach/v2.tex
 2026-02-10 21:15:03 -05:00
Dane Sabo
20c499ac35 Auto sync: 2026-02-09 13:49:24 (2 files changed) 
M  .DS_Store

M  3-research-approach/v2.tex
 2026-02-09 13:49:24 -05:00
Dane Sabo
c5e7784810 first commit 2026-02-06 20:23:52 -05:00