From 8deb3ed13030c9ecb34eff4ed510d606bf6f5a28 Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Wed, 13 Nov 2024 15:13:46 -0500 Subject: [PATCH 01/12] vault backup: 2024-11-13 15:13:46 --- 201 Metadata/My Library.bib | 37 +++++++++++++++++++++++++++++++++++++ 1 file changed, 37 insertions(+) diff --git a/201 Metadata/My Library.bib b/201 Metadata/My Library.bib index 7e04cf56..03130a02 100644 --- a/201 Metadata/My Library.bib +++ b/201 Metadata/My Library.bib @@ -8165,6 +8165,34 @@ Insights from the Social Sciences.pdf} file = {/home/danesabo/Zotero/storage/8EZ9FFD3/Module 10 Review.pdf 2251 NUCE 2100 SEC1250 FUNDAMENTALS NUCLEAR ENGR.pdf;/home/danesabo/Zotero/storage/BK36WRH6/17486254.html} } +@online{Module111Pressure, + title = {Module 11.1 - {{Pressure Drop}}.Pdf: 2251 {{NUCE}} 2100 {{SEC1250 FUNDAMENTALS NUCLEAR ENGR}}}, + url = {https://canvas.pitt.edu/courses/280885/files/17486318?module_item_id=5008255}, + urldate = {2024-11-12}, + file = {/home/danesabo/Zotero/storage/XLV9LK8M/Module 11.1 - Pressure Drop.pdf 2251 NUCE 2100 SEC1250 FUNDAMENTALS NUCLEAR ENGR.pdf;/home/danesabo/Zotero/storage/K7YI66P2/17486318.html} +} + +@online{Module112Closed, + title = {Module 11.2 - {{Closed Channel Analysis}}.Pdf: 2251 {{NUCE}} 2100 {{SEC1250 FUNDAMENTALS NUCLEAR ENGR}}}, + url = {https://canvas.pitt.edu/courses/280885/files/17486320?module_item_id=5008256}, + urldate = {2024-11-12}, + file = {/home/danesabo/Zotero/storage/777A5FPL/Module 11.2 - Closed Channel Analysis.pdf 2251 NUCE 2100 SEC1250 FUNDAMENTALS NUCLEAR ENGR.pdf;/home/danesabo/Zotero/storage/TKW3SUEL/17486320.html} +} + +@online{Module113TwoPhase, + title = {Module 11.3 - {{Two-Phase Flow}} and {{Boiling}}.Pdf: 2251 {{NUCE}} 2100 {{SEC1250 FUNDAMENTALS NUCLEAR ENGR}}}, + url = {https://canvas.pitt.edu/courses/280885/files/17486319?module_item_id=5008257}, + urldate = {2024-11-12}, + file = {/home/danesabo/Zotero/storage/EKZ5TJY3/Module 11.3 - Two-Phase Flow and Boiling.pdf 2251 NUCE 2100 SEC1250 FUNDAMENTALS NUCLEAR ENGR.pdf;/home/danesabo/Zotero/storage/V24U7V5E/17486319.html} +} + +@online{Module114Boiling, + title = {Module 11.4 - {{Boiling Crisis}}.Pdf: 2251 {{NUCE}} 2100 {{SEC1250 FUNDAMENTALS NUCLEAR ENGR}}}, + url = {https://canvas.pitt.edu/courses/280885/files/17486261?module_item_id=5008258}, + urldate = {2024-11-12}, + file = {/home/danesabo/Zotero/storage/8GFSZ3NN/Module 11.4 - Boiling Crisis.pdf 2251 NUCE 2100 SEC1250 FUNDAMENTALS NUCLEAR ENGR.pdf;/home/danesabo/Zotero/storage/KNVAQ22T/17486261.html} +} + @online{Module81Fission, title = {Module 8.1 - {{Fission Heat Generation-1}}.Pdf: 2251 {{NUCE}} 2100 {{SEC1250 FUNDAMENTALS NUCLEAR ENGR}}}, url = {https://canvas.pitt.edu/courses/280885/files/17486316?module_item_id=5008211}, @@ -10057,6 +10085,15 @@ Insights from the Social Sciences.pdf} file = {/home/danesabo/Zotero/storage/EX9JBPKZ/Qualifying Exam.pdf;/home/danesabo/Zotero/storage/9DYSHIPL/66db16e7e208c0cf7aee5549.html} } +@online{QualifyingExama, + title = {Qualifying {{Exam}}}, + url = {https://www.overleaf.com/project/66db16e7e208c0cf7aee5549}, + urldate = {2024-11-12}, + abstract = {An online LaTeX editor that’s easy to use. No installation, real-time collaboration, version control, hundreds of LaTeX templates, and more.}, + langid = {english}, + file = {/home/danesabo/Zotero/storage/TAJZZXSK/Qualifying Exam.pdf;/home/danesabo/Zotero/storage/WC366ERE/66db16e7e208c0cf7aee5549.html} +} + @article{raikwarSoKUsedCryptography2019, title = {{{SoK}} of {{Used Cryptography}} in {{Blockchain}}}, author = {Raikwar, Mayank and Gligoroski, Danilo and Kralevska, Katina}, From d18ad3860519a254a29188941229df275ed39e5c Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Wed, 13 Nov 2024 15:34:10 -0500 Subject: [PATCH 02/12] vault backup: 2024-11-13 15:34:10 --- 201 Metadata/My Library.bib | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) diff --git a/201 Metadata/My Library.bib b/201 Metadata/My Library.bib index 03130a02..cc87a5d9 100644 --- a/201 Metadata/My Library.bib +++ b/201 Metadata/My Library.bib @@ -46,6 +46,25 @@ file = {/home/danesabo/Zotero/storage/KZSJSUKD/Abelson et al. - 2022 - Structure and interpretation of computer programs.pdf} } +@article{abramsonAccurateStructurePrediction2024, + title = {Accurate Structure Prediction of Biomolecular Interactions with {{AlphaFold}} 3}, + author = {Abramson, Josh and Adler, Jonas and Dunger, Jack and Evans, Richard and Green, Tim and Pritzel, Alexander and Ronneberger, Olaf and Willmore, Lindsay and Ballard, Andrew J. and Bambrick, Joshua and Bodenstein, Sebastian W. and Evans, David A. and Hung, Chia-Chun and O’Neill, Michael and Reiman, David and Tunyasuvunakool, Kathryn and Wu, Zachary and Žemgulytė, Akvilė and Arvaniti, Eirini and Beattie, Charles and Bertolli, Ottavia and Bridgland, Alex and Cherepanov, Alexey and Congreve, Miles and Cowen-Rivers, Alexander I. and Cowie, Andrew and Figurnov, Michael and Fuchs, Fabian B. and Gladman, Hannah and Jain, Rishub and Khan, Yousuf A. and Low, Caroline M. R. and Perlin, Kuba and Potapenko, Anna and Savy, Pascal and Singh, Sukhdeep and Stecula, Adrian and Thillaisundaram, Ashok and Tong, Catherine and Yakneen, Sergei and Zhong, Ellen D. and Zielinski, Michal and Žídek, Augustin and Bapst, Victor and Kohli, Pushmeet and Jaderberg, Max and Hassabis, Demis and Jumper, John M.}, + date = {2024-06}, + journaltitle = {Nature}, + volume = {630}, + number = {8016}, + pages = {493--500}, + publisher = {Nature Publishing Group}, + issn = {1476-4687}, + doi = {10.1038/s41586-024-07487-w}, + url = {https://www.nature.com/articles/s41586-024-07487-w}, + urldate = {2024-11-13}, + abstract = {The introduction of AlphaFold\,21 has spurred a revolution in modelling the structure of proteins and their interactions, enabling a huge range of applications in protein modelling and design2–6. Here we describe our AlphaFold\,3 model with a substantially updated diffusion-based architecture that is capable of predicting the joint structure of complexes including proteins, nucleic acids, small molecules, ions and modified residues. The new AlphaFold model demonstrates substantially improved accuracy over many previous specialized tools: far greater accuracy for protein–ligand interactions compared with state-of-the-art docking tools, much higher accuracy for protein–nucleic acid interactions compared with nucleic-acid-specific predictors and substantially higher antibody–antigen prediction accuracy compared with AlphaFold-Multimer v.2.37,8. Together, these results show that high-accuracy modelling across biomolecular space is possible within a single unified deep-learning framework.}, + langid = {english}, + keywords = {Drug discovery,Machine learning,Protein structure predictions,Structural biology}, + file = {/home/danesabo/Zotero/storage/Y4BDPS2Y/Abramson et al. - 2024 - Accurate structure prediction of biomolecular interactions with AlphaFold 3.pdf} +} + @online{AbstractJulia, title = {{{AbstractJulia}}}, url = {https://www.algebraicjulia.org/} From 529e9db4bdd162615764ef313fd74f4c46c9197d Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Wed, 13 Nov 2024 16:38:13 -0500 Subject: [PATCH 03/12] vault backup: 2024-11-13 16:38:13 --- .../1 Managing Stuff/0. QE To Do List.md | 22 +++++++++---------- 1 file changed, 11 insertions(+), 11 deletions(-) diff --git a/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md b/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md index a57abf95..dcf2fa0c 100644 --- a/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md +++ b/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md @@ -1,11 +1,11 @@ # Old - [x] Read email from Dr. Cho with shared documents 📅 2024-09-25 ⏳ 2024-09-25 [completion:: 2024-10-16] - [x] Find papers on verifying robustness⏳ 2024-10-15 📅 2024-10-16 [completion:: 2024-10-15] -- [ ] Start writing about diffusion model📅 2024-10-15 - - [ ] What is the generative diffusion model? How does it work? - - [ ] How can we use this to generate new plants? - - [ ] How are we going to tell if they're in the unstrucutred perturbation disk? -- [ ] Create a one dimensional diffusion generative model 📅 2024-10-22 ⏳ 2024-10-17 +- [x] Start writing about diffusion model 📅 2024-10-15 ✅ 2024-11-13 + - [x] What is the generative diffusion model? How does it work? ✅ 2024-11-13 + - [x] How can we use this to generate new plants? ✅ 2024-11-13 + - [x] How are we going to tell if they're in the unstrucutred perturbation disk? ✅ 2024-11-13 +- [x] Create a one dimensional diffusion generative model ⏳ 2024-10-17 📅 2024-10-22 ✅ 2024-11-13 - [x] Write about how to generate unstructured perturbations📅 2024-10-15 [completion:: 2024-11-05] - [x] What is disk uncertainty? ✅ 2024-10-17 [completion:: 2024-11-05] - [x] Why is this something difficult to sample? [completion:: 2024-11-05] @@ -24,8 +24,8 @@ - Talk about filling the disk of uncertainty - [x] Finish writing risks and contingencies ✅ 2024-11-11 - [x] Write about fitting a model to the data for checking poles and creating useful models ✅ 2024-11-11 -- [ ] Make figures - - [ ] Flowchart for whole prcoess +- [x] Make figures ✅ 2024-11-13 + - [x] Flowchart for whole prcoess ✅ 2024-11-13 - This should include: - original bode plot - discretizing the plot @@ -42,10 +42,10 @@ # Milestones - [x] Goals and Outcomes Finished 🆔 kwyu6a ⏳ 2024-10-02 📅 2024-10-04 ✅ 2024-10-02 - [x] State of the Art Finished 🆔 i9ybdy ⏳ 2024-10-09 📅 2024-10-11 ✅ 2024-11-11 -- [*] Research Approach Finished 🆔 ha7il5 ⏳ 2024-10-21 📅 2024-10-23 -- [*] Broader Impacts, Metrics of Success, Risks and Contingincies Finished 🆔 6chcdh ⏳ 2024-10-28 📅 2024-11-01 -- [*] Written Proposal First Draft Complete 🆔 7spba6 ⛔ i9ybdy,6chcdh,kwyu6a,ha7il5 ⏳ 2024-11-01 📅 2024-11-05 -- [*] Written Proposal Submitted ⛔ 7spba6,6chcdh,0j2tb1,55hpqw,kwyu6a ⏳ 2024-11-11 📅 2024-11-13 +- [x] Research Approach Finished 🆔 ha7il5 ⏳ 2024-10-21 📅 2024-10-23 ✅ 2024-11-13 +- [x] Broader Impacts, Metrics of Success, Risks and Contingincies Finished 🆔 6chcdh ⏳ 2024-10-28 📅 2024-11-01 ✅ 2024-11-13 +- [x] Written Proposal First Draft Complete 🆔 7spba6 ⛔ i9ybdy,6chcdh,kwyu6a,ha7il5 ⏳ 2024-11-01 📅 2024-11-05 ✅ 2024-11-13 +- [x] Written Proposal Submitted ⛔ 7spba6,6chcdh,0j2tb1,55hpqw,kwyu6a ⏳ 2024-11-11 📅 2024-11-13 ✅ 2024-11-13 - [*] Oral Examination First Draft Complete ⏳ 2024-11-20 📅 2024-11-22 - [*] Oral Examination Final Draft Complete ⏳ 2024-11-25 📅 2024-11-27 - [*] QE Exam Complete! :) 📅 2024-12-03 \ No newline at end of file From 1d87ef8298da9a78df3d61f5f2e37dc382c4932d Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 10:45:14 -0500 Subject: [PATCH 04/12] vault backup: 2024-11-18 10:45:14 --- 0 Managerial Pages/To Do List.md | 5 ++++- 4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md | 2 +- 2 files changed, 5 insertions(+), 2 deletions(-) diff --git a/0 Managerial Pages/To Do List.md b/0 Managerial Pages/To Do List.md index 3f37b0f1..4b40e691 100644 --- a/0 Managerial Pages/To Do List.md +++ b/0 Managerial Pages/To Do List.md @@ -14,7 +14,10 @@ - [x] Find Classes📅 2024-10-21 🛫 2024-10-15 ⏳ 2024-10-15 [completion:: 2024-10-15] - [x] Fill out NRC Update for Mike📅 2024-10-28 🛫 2024-10-15 ⏳ 2024-10-15 [completion:: 2024-10-15] - [x] Abstract for NPIC+HMIT paper ⏳ 2024-10-21 📅 2024-10-25 ✅ 2025-10-25 -- [ ] What the hell is lobot? 📅 2024-11-07 ⏳ 2024-11-05 +- [x] What the hell is lobot? ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 - [ ] Pick out classes 📅 2024-11-07 ⏳ 2024-11-05 +- [ ] fix up to do lists. +- [ ] Figure out NUCE 2100 grade situation +- [ ] Find NRC wireless rfp # Class Stuff - [x] Move the sketches from my iPad to the notes for ME 2016 📅 2024-10-02 ✅ 2024-10-02 diff --git a/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md b/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md index dcf2fa0c..c1dca36c 100644 --- a/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md +++ b/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md @@ -38,7 +38,7 @@ - Partially done. Must explain that they are sets of plants - [x] Write broader impacts ✅ 2024-11-11 - [x] Write Tasks section ✅ 2024-11-11 -- [ ] Do a lot of formatting +- [x] Do a lot of formatting ✅ 2024-11-18 # Milestones - [x] Goals and Outcomes Finished 🆔 kwyu6a ⏳ 2024-10-02 📅 2024-10-04 ✅ 2024-10-02 - [x] State of the Art Finished 🆔 i9ybdy ⏳ 2024-10-09 📅 2024-10-11 ✅ 2024-11-11 From 5c373de0fdc4322c470a7bfa4de2ccfd04027222 Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 12:07:14 -0500 Subject: [PATCH 05/12] vault backup: 2024-11-18 12:07:14 --- 0 Managerial Pages/To Do List.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/0 Managerial Pages/To Do List.md b/0 Managerial Pages/To Do List.md index 4b40e691..ab54fac5 100644 --- a/0 Managerial Pages/To Do List.md +++ b/0 Managerial Pages/To Do List.md @@ -15,7 +15,7 @@ - [x] Fill out NRC Update for Mike📅 2024-10-28 🛫 2024-10-15 ⏳ 2024-10-15 [completion:: 2024-10-15] - [x] Abstract for NPIC+HMIT paper ⏳ 2024-10-21 📅 2024-10-25 ✅ 2025-10-25 - [x] What the hell is lobot? ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 -- [ ] Pick out classes 📅 2024-11-07 ⏳ 2024-11-05 +- [x] Pick out classes ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 - [ ] fix up to do lists. - [ ] Figure out NUCE 2100 grade situation - [ ] Find NRC wireless rfp From a92155ff53909cb5d42400c2ed57294995db754e Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 12:10:49 -0500 Subject: [PATCH 06/12] vault backup: 2024-11-18 12:10:49 --- 0 Managerial Pages/To Do List.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/0 Managerial Pages/To Do List.md b/0 Managerial Pages/To Do List.md index ab54fac5..c4a8225c 100644 --- a/0 Managerial Pages/To Do List.md +++ b/0 Managerial Pages/To Do List.md @@ -16,8 +16,8 @@ - [x] Abstract for NPIC+HMIT paper ⏳ 2024-10-21 📅 2024-10-25 ✅ 2025-10-25 - [x] What the hell is lobot? ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 - [x] Pick out classes ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 -- [ ] fix up to do lists. -- [ ] Figure out NUCE 2100 grade situation -- [ ] Find NRC wireless rfp +- [ ] fix up to do lists. 📅 2024-11-18 +- [ ] Figure out NUCE 2100 grade situation 📅 2024-11-18 +- [ ] Find NRC wireless rfp 📅 2024-11-19 # Class Stuff - [x] Move the sketches from my iPad to the notes for ME 2016 📅 2024-10-02 ✅ 2024-10-02 From 9fc170c35266d542e26b571fc7402603d8dd989e Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 12:32:58 -0500 Subject: [PATCH 07/12] vault backup: 2024-11-18 12:32:58 --- 0 Managerial Pages/To Do List.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/0 Managerial Pages/To Do List.md b/0 Managerial Pages/To Do List.md index c4a8225c..bb9eac30 100644 --- a/0 Managerial Pages/To Do List.md +++ b/0 Managerial Pages/To Do List.md @@ -17,7 +17,7 @@ - [x] What the hell is lobot? ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 - [x] Pick out classes ⏳ 2024-11-05 📅 2024-11-07 ✅ 2024-11-18 - [ ] fix up to do lists. 📅 2024-11-18 -- [ ] Figure out NUCE 2100 grade situation 📅 2024-11-18 +- [x] Figure out NUCE 2100 grade situation 📅 2024-11-18 ✅ 2024-11-18 - [ ] Find NRC wireless rfp 📅 2024-11-19 # Class Stuff - [x] Move the sketches from my iPad to the notes for ME 2016 📅 2024-10-02 ✅ 2024-10-02 From 97799e89cdd8bccc3fefb8bf6cdd842b8c786716 Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 12:37:17 -0500 Subject: [PATCH 08/12] vault backup: 2024-11-18 12:37:16 --- .obsidian/bookmarks.json | 5 +++++ .../To Do - ME 2016.md | 4 ++++ 300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do.md | 3 --- .../2024-11-12 Homework 8.md | 2 +- 4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md | 1 + 5 files changed, 11 insertions(+), 4 deletions(-) create mode 100644 300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do - ME 2016.md delete mode 100644 300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do.md diff --git a/.obsidian/bookmarks.json b/.obsidian/bookmarks.json index dff0ba7f..59139b73 100644 --- a/.obsidian/bookmarks.json +++ b/.obsidian/bookmarks.json @@ -9,6 +9,11 @@ "type": "file", "ctime": 1730397409494, "path": "4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md" + }, + { + "type": "file", + "ctime": 1731951337156, + "path": "300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do - ME 2016.md" } ] } \ No newline at end of file diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do - ME 2016.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do - ME 2016.md new file mode 100644 index 00000000..bc2a4375 --- /dev/null +++ b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do - ME 2016.md @@ -0,0 +1,4 @@ +# Homework +- [x] Homework 2 🛫 2024-10-02 📅 2024-10-04 ✅ 2024-10-04 +- [x] Homework 3 🛫 2024-10-14 📅 2024-10-18 ✅ 2024-10-22 +- [ ] Mini Project 2 📅 2024-11-22 \ No newline at end of file diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do.md deleted file mode 100644 index f43afb76..00000000 --- a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/To Do.md +++ /dev/null @@ -1,3 +0,0 @@ -# Homework -- [x] Homework 2 🛫 2024-10-02 📅 2024-10-04 ✅ 2024-10-04 -- [x] Homework 3 🛫 2024-10-14 📅 2024-10-18 ✅ 2024-10-22 \ No newline at end of file diff --git a/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-12 Homework 8.md b/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-12 Homework 8.md index 75ab5af6..1e651499 100644 --- a/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-12 Homework 8.md +++ b/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-12 Homework 8.md @@ -5,5 +5,5 @@ date: 2024-11-12 endDate: 2024-11-13 completed: null --- - - [ ] Homework 8 📅 2024-11-12 + - [-] Homework 8 📅 2024-11-12 #Homework \ No newline at end of file diff --git a/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md b/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md index c1dca36c..848d6b19 100644 --- a/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md +++ b/4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md @@ -39,6 +39,7 @@ - [x] Write broader impacts ✅ 2024-11-11 - [x] Write Tasks section ✅ 2024-11-11 - [x] Do a lot of formatting ✅ 2024-11-18 +- [ ] Create presentation outline📅 2024-11-20 # Milestones - [x] Goals and Outcomes Finished 🆔 kwyu6a ⏳ 2024-10-02 📅 2024-10-04 ✅ 2024-10-02 - [x] State of the Art Finished 🆔 i9ybdy ⏳ 2024-10-09 📅 2024-10-11 ✅ 2024-11-11 From 90dc5a4a5bfbf3d064ac64d217fd409428f3a2a8 Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 12:44:23 -0500 Subject: [PATCH 09/12] vault backup: 2024-11-18 12:44:23 --- .obsidian/bookmarks.json | 11 +++- 0 Managerial Pages/1. Task Dashboard.md | 1 - 1 Daily Notes/2024/11 November/2024-11-08.md | 50 +++++++++++++++++++ 1 Daily Notes/2024/11 November/2024-11-11.md | 50 +++++++++++++++++++ 1 Daily Notes/2024/11 November/2024-11-12.md | 50 +++++++++++++++++++ 1 Daily Notes/2024/11 November/2024-11-13.md | 50 +++++++++++++++++++ 1 Daily Notes/2024/11 November/2024-11-14.md | 50 +++++++++++++++++++ 1 Daily Notes/2024/11 November/2024-11-15.md | 50 +++++++++++++++++++ 1 Daily Notes/2024/11 November/2024-11-18.md | 50 +++++++++++++++++++ .../2024-11-18.md | 0 .../Mini Project.md | 20 ++++---- .../2024-11-05 Homework 7.md | 4 +- 12 files changed, 371 insertions(+), 15 deletions(-) create mode 100644 1 Daily Notes/2024/11 November/2024-11-08.md create mode 100644 1 Daily Notes/2024/11 November/2024-11-11.md create mode 100644 1 Daily Notes/2024/11 November/2024-11-12.md create mode 100644 1 Daily Notes/2024/11 November/2024-11-13.md create mode 100644 1 Daily Notes/2024/11 November/2024-11-14.md create mode 100644 1 Daily Notes/2024/11 November/2024-11-15.md create mode 100644 1 Daily Notes/2024/11 November/2024-11-18.md create mode 100644 300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18.md diff --git a/.obsidian/bookmarks.json b/.obsidian/bookmarks.json index 59139b73..b714728f 100644 --- a/.obsidian/bookmarks.json +++ b/.obsidian/bookmarks.json @@ -1,14 +1,21 @@ { "items": [ + { + "type": "file", + "ctime": 1731951492555, + "path": "0 Managerial Pages/1. Task Dashboard.md" + }, { "type": "file", "ctime": 1730397400319, - "path": "0 Managerial Pages/To Do List.md" + "path": "0 Managerial Pages/To Do List.md", + "title": "To Do - General" }, { "type": "file", "ctime": 1730397409494, - "path": "4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md" + "path": "4 Qualifying Exam/1 Managing Stuff/0. QE To Do List.md", + "title": "To Do - Qualifying Exam" }, { "type": "file", diff --git a/0 Managerial Pages/1. Task Dashboard.md b/0 Managerial Pages/1. Task Dashboard.md index 5c2a5482..f194871c 100755 --- a/0 Managerial Pages/1. Task Dashboard.md +++ b/0 Managerial Pages/1. Task Dashboard.md @@ -35,7 +35,6 @@ where !completed and due > date(today) and due < date(today) + dur(2 w) sort due asc -group by file.folder ``` ## On The Horizon --- diff --git a/1 Daily Notes/2024/11 November/2024-11-08.md b/1 Daily Notes/2024/11 November/2024-11-08.md new file mode 100644 index 00000000..65b650c1 --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-08.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-08 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-07]] | [[1 Daily Notes/2024/11 November/2024-11-11 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-06]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/1 Daily Notes/2024/11 November/2024-11-11.md b/1 Daily Notes/2024/11 November/2024-11-11.md new file mode 100644 index 00000000..733443a7 --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-11.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-11 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-08]] | [[1 Daily Notes/2024/11 November/2024-11-12 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-06]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/1 Daily Notes/2024/11 November/2024-11-12.md b/1 Daily Notes/2024/11 November/2024-11-12.md new file mode 100644 index 00000000..84a5be6a --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-12.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-12 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-11]] | [[1 Daily Notes/2024/11 November/2024-11-13 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-06]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/1 Daily Notes/2024/11 November/2024-11-13.md b/1 Daily Notes/2024/11 November/2024-11-13.md new file mode 100644 index 00000000..ca31faac --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-13.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-13 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-12]] | [[1 Daily Notes/2024/11 November/2024-11-14 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-06]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/1 Daily Notes/2024/11 November/2024-11-14.md b/1 Daily Notes/2024/11 November/2024-11-14.md new file mode 100644 index 00000000..405e236d --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-14.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-14 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-13]] | [[1 Daily Notes/2024/11 November/2024-11-15 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-13]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/1 Daily Notes/2024/11 November/2024-11-15.md b/1 Daily Notes/2024/11 November/2024-11-15.md new file mode 100644 index 00000000..7e52c4b8 --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-15.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-15 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-14]] | [[1 Daily Notes/2024/11 November/2024-11-18 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-13]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/1 Daily Notes/2024/11 November/2024-11-18.md b/1 Daily Notes/2024/11 November/2024-11-18.md new file mode 100644 index 00000000..1afe6fe0 --- /dev/null +++ b/1 Daily Notes/2024/11 November/2024-11-18.md @@ -0,0 +1,50 @@ +--- +date: 2024-11-18 +tags: +--- +# Yesterday | Tomorrow + << [[1 Daily Notes/2024/11 November/2024-11-15]] | [[1 Daily Notes/2024/11 November/2024-11-19 ]] >> +# This Week's Weekly Note +[[ Weekly Note 2024-11-13]] +# Tasks for today +## Due +```dataview +task +where + due <= date(this.date) + and due + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Scheduled +```dataview +task +where + scheduled + and scheduled <= date(this.date) + and !completed + and status != "-" +sort due asc +group by file.folder +``` +## Tasks in Progress +```dataview +task +where +status != "-" +and status = "/" +sort due asc +group by file.folder +``` +## Completed +```dataview +task +where + completed + and completion = date(this.date) +sort due asc +group by file.folder +``` +# Calendar Tasks \ No newline at end of file diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18.md new file mode 100644 index 00000000..e69de29b diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/Mini Project.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/Mini Project.md index f65269de..461f70bf 100644 --- a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/Mini Project.md +++ b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/Mini Project.md @@ -1,11 +1,11 @@ # Progress -- [ ] Read paper - - [ ] What are the modeling assumptions? - - [ ] What are the solution approaches? - - [ ] Do other things from class relate? -- [ ] Rederive equations and solutions from the paper - - [ ] What do they leave out? - - [ ] Make things 'VERY CLEAR' -- [ ] Numerical Solution - - [ ] Recreate figure 3 - - [ ] Make a parallel implementation \ No newline at end of file +- [x] Read paper [completion:: 2024-11-18] + - [x] What are the modeling assumptions? [completion:: 2024-11-18] + - [x] What are the solution approaches? [completion:: 2024-11-18] + - [x] Do other things from class relate? [completion:: 2024-11-18] +- [x] Rederive equations and solutions from the paper [completion:: 2024-11-18] + - [x] What do they leave out? [completion:: 2024-11-18] + - [x] Make things 'VERY CLEAR' [completion:: 2024-11-18] +- [x] Numerical Solution [completion:: 2024-11-18] + - [x] Recreate figure 3 [completion:: 2024-11-18] + - [x] Make a parallel implementation [completion:: 2024-11-18] \ No newline at end of file diff --git a/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-05 Homework 7.md b/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-05 Homework 7.md index dabc0b13..b165d545 100644 --- a/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-05 Homework 7.md +++ b/300s School/NUCE 2100 - Fundamentals of Nuclear Engineering/2024-11-05 Homework 7.md @@ -6,5 +6,5 @@ endDate: 2024-11-06 completed: 2024-11-06T09:47:22.930-05:00 type: single --- -- [ ] Homework 7 📅 2024-11-05 -#Homework \ No newline at end of file +- [x] Homework 7 📅 2024-11-05 + #Homework [completion:: 2024-11-18] \ No newline at end of file From fd1038ab3a6bdec1299eb45a775c7f1bbe1db5b5 Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 13:18:54 -0500 Subject: [PATCH 10/12] vault backup: 2024-11-18 13:18:54 --- .../2024-11-18 Volume Contraction.md | 15 +++++++++++++++ .../2024-11-18.md | 0 2 files changed, 15 insertions(+) create mode 100644 300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md delete mode 100644 300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18.md diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md new file mode 100644 index 00000000..a791910d --- /dev/null +++ b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md @@ -0,0 +1,15 @@ +Lorenz system is dissapative. This means: +- Volume in phase space contracts with flow? +This introduces some questions... How do volumes evolve? + +Suppose a surface $S(t)$ encloses volume $V(t)$, with normal vectors pointing away from the surface ($\vec{n}$). + +A trajectory starts on S. let them evolve for $dt$. With a flux vector $\vec{f}$, we have +- $\vec f \cdot \vec n$ - normal, outward component of velocity +In $dt$ time, $dA$ sweeps out a volume. + +Volume: $(\vec f \cdot \vec n dt)dA$ +$$V(t+dt) = V(t) + \int_S (\vec f \cdot \vec n dt)dA $$ +$$\dot{V} = \int_S (\vec f \cdot \vec n)dA $$ +Now we can apply the divergence theorem: +$$\dot{V} = \int_V (\nabla \cdot \vec f )dV $$ diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18.md deleted file mode 100644 index e69de29b..00000000 From 177a43a14063803909cec1b0c4420636d3e38748 Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 13:23:41 -0500 Subject: [PATCH 11/12] vault backup: 2024-11-18 13:23:41 --- .../2024-11-18 Volume Contraction.md | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md index a791910d..c4c49449 100644 --- a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md +++ b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md @@ -13,3 +13,9 @@ $$V(t+dt) = V(t) + \int_S (\vec f \cdot \vec n dt)dA $$ $$\dot{V} = \int_S (\vec f \cdot \vec n)dA $$ Now we can apply the divergence theorem: $$\dot{V} = \int_V (\nabla \cdot \vec f )dV $$ +If you start with a solid blob of initial conditions, this integral will evaluate down to where things end up. If $\dot V$ is negative, then the system will converge to a stable subspace. +Limiting set will consist of +- fixed points +- limit cycles +- strong attractors +Proving which type something will end up on \ No newline at end of file From faebd5d307023551824fc556f23f8fae3b5c771d Mon Sep 17 00:00:00 2001 From: Dane Sabo Date: Mon, 18 Nov 2024 13:30:02 -0500 Subject: [PATCH 12/12] vault backup: 2024-11-18 13:30:02 --- .../2024-11-18 Volume Contraction.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md index c4c49449..d2ec5efa 100644 --- a/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md +++ b/300s School/ME 2016 - Nonlinear Dynamical Systems 1/2024-11-18 Volume Contraction.md @@ -1,7 +1,7 @@ Lorenz system is dissapative. This means: - Volume in phase space contracts with flow? This introduces some questions... How do volumes evolve? - +n Suppose a surface $S(t)$ encloses volume $V(t)$, with normal vectors pointing away from the surface ($\vec{n}$). A trajectory starts on S. let them evolve for $dt$. With a flux vector $\vec{f}$, we have @@ -18,4 +18,4 @@ Limiting set will consist of - fixed points - limit cycles - strong attractors -Proving which type something will end up on \ No newline at end of file +Proving which type something will end up on is much harder. But, repellers will always result in a positive $\dot V$. \ No newline at end of file